| The effects of gene recruitment on the evolvability and robustness of pattern-forming gene networks | David Holloway |
| Design of a dynamic model of genes with multiple autonomous regulatory modules by evolutionary computations | David Holloway |
| Retroviral genetic algorithms | David Holloway |
| New approaches to designing genes by evolution in the computer | David Holloway |
| Evolution in silico of genes with multiple regulatory modules on the example of the Drosophila segmentation gene hunchback | David Holloway |
| Gene expression noise in embryonic spatial patterning | David Holloway |
| Mid-embryo patterning and precision in Drosophila segmentation | David Holloway |
| Stochastic dynamics of gene expression in developing fly embryos | David Holloway |
| Noise in the segmentation gene network of Drosophila, with implications for mechanisms of body axis specification | David Holloway |
| Making the body plan | David Holloway |
| Analysis of pattern precision shows that Drosophila segmentation develops substantial independence from gradients of maternal gene products | David Holloway |
| Spatial bistability generates hunchback expression sharpness in the drosophila embryo | David Holloway |
| Measuring gene expression noise in early drosophila embryos | David Holloway |
| Experimental determination of intrinsic drosophila embryo coordinates by evolutionary computation | David Holloway |
| Shaped singular spectrum analysis for quantifying gene expression, with application to the early drosophila embryo | David Holloway |
| Shaped 3D singular spectrum analysis for quantifying gene expression, with application to the early zebrafish embryo | David Holloway |
| Recruiting new genes in evolving genetic networks | David Holloway |
| Pattern selection in plants | David Holloway |
| The chemical kinetics of shape determination in plants | David Holloway |
| Dynamic regulation of growing domains for elongating and branching morphogenesis in plants | David Holloway |
| A quantitative study of cotyledon positioning in conifer development | David Holloway |
| Evolutionary techniques for image processing a large dataset of early drosophila gene expression | David Holloway |
| In silico evolution of the hunchback gene indicates redundancy in cis-regulatory organization and spatial gene expression | David Holloway |
| Evolutionary design of gene networks | David Holloway |
| Using EA to study the evolution of GRNs controlling biological development | David Holloway |
| Suppression of positional errors in biological development | David Holloway |
| Sharp borders from fuzzy gradients | David Holloway |
| Variable patterning in fruit fly embryos due to basins of attraction in underlying gene regulatory dynamics | David Holloway |
| In silico evolution of gene cooption in pattern-forming gene networks | David Holloway |
| Modeling the evolution of gene regulatory networks for spatial patterning in embryo development | David Holloway |
| Using evolutionary computations to understand the design and evolution of gene and cell regulatory networks | David Holloway |
| Transcriptional bursting in drosophila development | David Holloway |
| Computations of post-inductive dynamics in axolotl heart formation | David Holloway |
| Algal morphogenesis | David Holloway |
| Maintaining apical dominance in the fern gametophyte | David Holloway |
| Gene expression noise in spatial patterning | David Holloway |
